- Eagle Island
- Eagle Creek
- Eagle Point
- East Gardiner
- East Island
- East Maupin
- Eastside
- Echo
- Echo Dell
- Echo Island
- Eddyville
- Eden
- Edenbower
- Eightmile
- Eldorado
- Elgarose
- Elgin
- Elk City
- Elk Island (historical)
- Elk Lake
- Elk Rock Island
- Elkhead
- Elkhorn
- Elkhorn Woods
- Elkton
- Ella
- Ellendale
- Elliott Prairie
- Elmira
- Elmonica